bioinfo@ird.fr

i-Trop

Plant & Health Bioinformatics Platform

Our missions

The i-Trop platform is composed of 6 informaticians and bioinformaticians members of four IRD research units

The i-Trop platform gives access to these research units and their partners to an ISO 9001 certified HPC cluster, conducts trainings, installs tools and provides ressources to perform their bioinformatics analysis.

It is based on the IRD center of Montpellier, member of the Southgreen platform and of the IFB.

HPC Users

Projects

Trainings

Staff members

Last news

Softwares Installation in May 2021

The following softwares have been installed in May BEAST version: 2.6.4 Description: BEAST is a cross-platform program for Bayesian MCMC analysis of molecular sequences. URL: http://beast.bio.ed.ac.uk/Main_Page Command to load its[…]

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Software installations in April 2021

The following software have been installed in April: iqtree version: 2.1.2 Description: Efficient software for phylogenomic inference URL: http://www.iqtree.org/ Command to load its environment: module load bioinfo/iqtree/2.1.2 phame version: 1.0.2[…]

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Software installations in March 2021

The following softwares have been installed in march: kraken2 version: 2.1.1 description: The second version of the Kraken taxonomic sequence classification system URL: https://github.com/DerrickWood/kraken2 gatk version: 4.2.0.0 description: The GATK[…]

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