Tutoriaux
- All
- Bioanalysis
- Cluster
- Cluster I-Trop
- Toolbox
Howtos pour le cluster I-Trop
Tutoriel décrivant l'utilisation du cluster I-Trop
Par Ndomassi TANDO | 01/02/2024
How to mettre en place les clés ssh sur son ordinateur
Comment ajouter vos clés ssh sur votre ordinateur pour se connecter au cluster
Par Ndomassi TANDO | 06/02/24
How to reserve cluster resources
This page describes the main commands needed to allocate resources in cluster.
By Christine. Tranchant-Dubreuil et Julie Orjuela-Bouniol
Managing data after analysis
This page describe how to manage your data after analysis.
By Christine. Tranchant-Dubreuil et Julie Orjuela-Bouniol
HPC Connection
How connect on HPC
By christine Tranchant-Dubreuil | 11/03/2018
Slurm
Utilisation de Slurm sur le cluster i-Trop.
Par Ndomassi TANDO | 08/11/2019
Linux tutorial
By christine Tranchant-Dubreuil | 20/10/2018
R Survival Manual
R tutorial
By christine Tranchant-Dubreuil | 21/09/2018
Polymorphism detection
Polymorphism detection from fastq files on a linux terminal
By christine Tranchant-Dubreuil | 10/03/2017
vcfExtract
Commands to manipulate VCF files
By christine Tranchant-Dubreuil | 25/03/2018
FROGs in command line
This page describes how to launch FROGs in command line from IRD cluster.
By Julie ORJUELA | 22/03/2019
Qiime2 in command line
Metabarcoding using Qiime2 and DADA2
By Marie Simonin and Julie Orjuela | 22/03/2019
Assembly with Trinity
De novo transcriptome assembly and functional annotation of transcrits.
By Julie Orjuela | 10/08/2018
GPU
Know how to use GPU node in I-Trop cluster
By Julie ORJUELA and Aurore COMTE | 27/01/2020
Git for dummies
Git tutorial
By Christine Tranchant-Dubreuil | 10/03/2017
Docker for dumpies
This page describes describes the main commands you need in order to use Docker.
By Christine Tranchant-Dubreuil
Practical RNAseq
This page describes describes the main commands needed to analyse your RNAseq data.
By Christine. Tranchant-Dubreuil et Julie Orjuela-Bouniol
How to utiliser les features pour choisir un noeud
Tutoriel décrivant l'utilisation des features Slurm pour choisir un noeud
Par Ndomassi TANDO | 02/02/2024
how to utiliser le réseau infiniband pour transférer ses données
Tutoriel décrivant l'utilisation du réseau infiniband pour effectuer des transferts
Par Ndomassi TANDO | 02/02/2024
