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Linux For DummiesThis course offers an introduction to work with Linux. We will describe the Linux environment, the first linux commands so participants can start to utilize command-line tools and feel comfortablei using bioinformatics softwares through a linux terminal. |
Prerequisites
No experience required
Program
- Connecting to a distant HPC
- Navigating through a Unix file system
- Creating and deleting files
- Manipuling and filtering file text
- Basics searching for text within a file
Learning objectives
After this course, participants should be able to:
- Connect to a Unix / Linux system
- Manipulate files and directories within the Linux system
- Work with text files
- Run programs from the command-line
Instructors
- Christine Tranchant (CT) - christine.tranchant@ird.fr (UMR DIADE)
- Sebastien Ravel (SR) - sebastien.ravel@cirad.fr (UMR BGPI)
- Alexis Dereeper (AD) - alexis.dereeper@ird.fr (UMR IPME)
- Ndomassi Tando (NT) - ndomassi.tando@ird.fr (UMR DIADE)
- François Sabot (SB) - francois.sabot@ird.fr (UMR DIADE)
- Gautier Sarah (GSa) - gautier.sarah@cirad.fr (UMR AGAP)
- Bruno Granouillac (BG) - bruno.granouillac@ird.fr (UMR TransVIH-MI/MIVEGEC)
- Marilyne Summo (MS) - marilyne.summo@cirad.fr (UMR AGAP)
- Clement Agret (CA) - clement.agret@cirad.fr (UMR AGAP)
- Guilhem Sempéré (GSe) - guilhem.sempere@cirad.fr (UMR INTERTRYP)
- Florentin Constancias (FC) - florentin.constancias@cirad.fr (UMR Qualisud)
- Valérie Noël (VN) - valerie.noel@ird.fr (UMR MIVEGEC)
Trainings
| Date | Location | Topics | Participants | Instructors | Links | Units |
|---|---|---|---|---|---|---|
| 2019 | Montpellier, France | Linux For Dummies | 20 | CT, NT,GSe, FC, VN | UMR AGAP, BGPI, DIADE, IPME, Qualisud, MIVEGEC | |
| 2018 | Montpellier, France | Linux For Dummies | 24 | GSa, CT, CA, MS | UMR AGAP | |
| 2018 | Montpellier, France | Linux For Dummies | 20 | CT, NT, BG, FS, GSa | UMR DIADE, IPME, MIVEGEC, transVIH-MI | |
| 2017 | Dakar, Senegal | Linux & Perl | 20 | ND, CT, FS | IRD, Bel Air Campus | |
| 2016 | Ouagadougou, Burkina | Bioinformatics applied to genomics | 20 | CT, AD | IRD | |
| 2014 | Sao Paulo, Brazil | Bioinformatics applied to genomics | 20 | CT | University of Sao Paulo | |
| 2014 | Dakar, Senegal | Bioinformatics applied to genomics | 20 | CT, AD | IRD, Bel Air Campus | |
| 2013 | Dakar, Senegal | Bioinformatics applied to genomics | 20 | CT, AD, BG | University of Dakar (UCAD) | |
| 2013 | Montpellier, France | Bioinformatics applied to genomics | 30 | CT, BG | UMR DIADE, IMPE, MIVEGEC, LSTM | |
| 2012 | Ouagadougou, Burkina | Bioinformatics applied to genomics | 20 | BG, AD | IRD | |
| 2012 | Montpellier, France | Bioinformatics applied to genomics | 30 | CT, BG | UMR DIADE, IMPE, MIVEGEC, LSTM | |
| 2011 | Montpellier, France | Bioinformatics applied to genomics | 30 | CT, BG | UMR DIADE, IMPE, MIVEGEC, LSTM |
