Trainings 2019 – Galaxy


This course is an introduction to the Galaxy environment.
Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.


No experience required


  • Data upload, histories and data formats
  • My first analyses with Galaxy
  • My first workflow with Galaxy
  • How to share my work
  • Concrete application: from raw reads to SNPs

Learning objectives

  • Familiarize yourself with the basics of Galaxy
  • Learn how to run tools
  • Learn how histories work
  • Learn how to create a workflow
  • Learn how to share your work

Training material

  • Slides : see
  • Galaxy: Go


  • Alexis Dereeper (AD)
  • Sebastien Ravel (SR)
  • Christine Tranchant (CT)
  • Aurore Comte (AC)
  • Marilyne Summo (MS)


Date Location Topics Participants Instructors Links Units
2019 Montpellier, France Workflow manager 16 AC, MS, SR UMR DIADE, IMPE, MIVEGEC, AGAP, TransVIHMi
2018 Montpellier, France Workflow management systems 16 AD, CT, SR UMR DIADE, IMPE, MIVEGEC, AGAP, TransVIHMi