{"id":833,"date":"2020-11-06T09:22:10","date_gmt":"2020-11-06T08:22:10","guid":{"rendered":"https:\/\/itrop.ird.fr\/wordpress\/?page_id=833"},"modified":"2022-04-06T14:50:07","modified_gmt":"2022-04-06T12:50:07","slug":"833-2","status":"publish","type":"page","link":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/","title":{"rendered":"Trainings 2019 &#8211; PERL"},"content":{"rendered":"<h2>PERL<\/h2>\n<table class=\"table-contact\">\n<tr>\n<td><img decoding=\"async\" width=\"150%\" class=\"img-responsive\" src=\"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png\" alt=\"\" \/>\n<\/td>\n<td>\nThis course provides an introduction to programming using Perl and at the end of the training, participants could write simple Perl programs to handle biological data and to undertstand more complex Perl programs written by others.\n<\/td>\n<\/tr>\n<\/table>\n<h3>Prerequisites<\/h3>\n<p>Basic knowledge of Linux (Linux for dummies required)<\/p>\n<div id=\"colonne1\">\n<h3>Program<\/h3>\n<ul>\n<li>Perl data structures (scalar,arrays, hashes)<\/li>\n<li>Structure control ( loops)<\/li>\n<li>Basic functions, and operators.<\/li>\n<li>Writing and running your own program<\/li>\n<li>Passing options and files to his own script.<\/li>\n<li>Regular expressions<\/li>\n<\/ul>\n<\/div>\n<div id=\"colonne2\">\n<h3>Learning objectives<\/h3>\n<ul>\n<li>Writing simple Perl programs to analyze data files<\/li>\n<li>Understanding Perl programs written by others<\/li>\n<li>Using Perl basic syntax and modules in their own script <\/li>\n<li>Run programs from their script, parsing and extracting data from data files<\/li>\n<\/ul>\n<\/div>\n<div id=\"colonne3\">\n<h3>Training material<\/h3>\n<ul>\n<li>Slides : <a target=\"_blank\" href=\"https:\/\/southgreenplatform.github.io\/trainings\/\/files\/perl\/perl-2017-v1.pdf\" rel=\"noopener noreferrer\">see<\/a><\/li>\n<\/ul>\n<\/div>\n<div id=\"nextInline\" class=\"clearfix\">\n<h3>Instructors<\/h3>\n<ul>\n<li>Christine Tranchant (CT) - christine.tranchant@ird.fr<\/li>\n<li>Fran\u00e7ois Sabot (SB)<\/li>\n<li>Alexis Dereeper (AD)<\/li>\n<li>Gaetan Droc(GD)<\/li>\n<\/ul>\n<\/div>\n<h3>Trainings<\/h3>\n<table>\n<thead>\n<tr>\n<th><strong>Date<\/strong><\/th>\n<th><strong>Location<\/strong><\/th>\n<th><strong>Topics<\/strong><\/th>\n<th><strong>Parrticipants<\/strong><\/th>\n<th><strong>Instructors<\/strong><\/th>\n<th><strong>Links<\/strong><\/th>\n<th><strong>Units<\/strong><\/th>\n<\/tr>\n<\/thead>\n<tbody>\n<tr>\n<td>2017<\/td>\n<td>Dakar, Senegal<\/td>\n<td>Linux &amp; Perl<\/td>\n<td>20<\/td>\n<td>CT, FS<\/td>\n<td><\/td>\n<td>IRD, Bel Air Campus<\/td>\n<\/tr>\n<tr>\n<td>2015<\/td>\n<td>Montpellier, France<\/td>\n<td>Perl for the genomics<\/td>\n<td>20<\/td>\n<td>CT, FS, GD, AD<\/td>\n<td><\/td>\n<td>UMR AGAP, BGPI, DIADE, IMPE, MIVEGEC, INTERTRYP<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n","protected":false},"excerpt":{"rendered":"<p>PERL This course provides an introduction to programming using Perl and at the end of the training, participants could write&hellip; <br \/> <a class=\"read-more\" href=\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/\">Lire la suite<\/a><\/p>\n","protected":false},"author":1,"featured_media":0,"parent":1321,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"inline_featured_image":false,"footnotes":""},"class_list":["post-833","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v24.2 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Trainings 2019 - PERL - itrop<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/\" \/>\n<meta property=\"og:locale\" content=\"fr_FR\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Trainings 2019 - PERL - itrop\" \/>\n<meta property=\"og:description\" content=\"PERL This course provides an introduction to programming using Perl and at the end of the training, participants could write&hellip; Lire la suite\" \/>\n<meta property=\"og:url\" content=\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/\" \/>\n<meta property=\"og:site_name\" content=\"itrop\" \/>\n<meta property=\"article:modified_time\" content=\"2022-04-06T12:50:07+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:site\" content=\"@ItropBioinfo\" \/>\n<meta name=\"twitter:label1\" content=\"Dur\u00e9e de lecture estim\u00e9e\" \/>\n\t<meta name=\"twitter:data1\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\/\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/\",\"url\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/\",\"name\":\"Trainings 2019 - PERL - itrop\",\"isPartOf\":{\"@id\":\"https:\/\/bioinfo.ird.fr\/#website\"},\"primaryImageOfPage\":{\"@id\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#primaryimage\"},\"image\":{\"@id\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#primaryimage\"},\"thumbnailUrl\":\"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png\",\"datePublished\":\"2020-11-06T08:22:10+00:00\",\"dateModified\":\"2022-04-06T12:50:07+00:00\",\"breadcrumb\":{\"@id\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#breadcrumb\"},\"inLanguage\":\"fr-FR\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/\"]}]},{\"@type\":\"ImageObject\",\"inLanguage\":\"fr-FR\",\"@id\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#primaryimage\",\"url\":\"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png\",\"contentUrl\":\"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png\"},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Accueil\",\"item\":\"https:\/\/bioinfo.ird.fr\/index.php\/en\/front-page-2\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Trainings &#8211; FR\",\"item\":\"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/\"},{\"@type\":\"ListItem\",\"position\":3,\"name\":\"Trainings 2019 &#8211; PERL\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\/\/bioinfo.ird.fr\/#website\",\"url\":\"https:\/\/bioinfo.ird.fr\/\",\"name\":\"itrop\",\"description\":\"\",\"publisher\":{\"@id\":\"https:\/\/bioinfo.ird.fr\/#organization\"},\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\/\/bioinfo.ird.fr\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"fr-FR\"},{\"@type\":\"Organization\",\"@id\":\"https:\/\/bioinfo.ird.fr\/#organization\",\"name\":\"i-Trop\",\"url\":\"https:\/\/bioinfo.ird.fr\/\",\"logo\":{\"@type\":\"ImageObject\",\"inLanguage\":\"fr-FR\",\"@id\":\"https:\/\/bioinfo.ird.fr\/#\/schema\/logo\/image\/\",\"url\":\"https:\/\/bioinfo.ird.fr\/wp-content\/uploads\/2021\/10\/i-tropTwt5.png\",\"contentUrl\":\"https:\/\/bioinfo.ird.fr\/wp-content\/uploads\/2021\/10\/i-tropTwt5.png\",\"width\":1356,\"height\":1356,\"caption\":\"i-Trop\"},\"image\":{\"@id\":\"https:\/\/bioinfo.ird.fr\/#\/schema\/logo\/image\/\"},\"sameAs\":[\"https:\/\/x.com\/ItropBioinfo\"]}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Trainings 2019 - PERL - itrop","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/","og_locale":"fr_FR","og_type":"article","og_title":"Trainings 2019 - PERL - itrop","og_description":"PERL This course provides an introduction to programming using Perl and at the end of the training, participants could write&hellip; Lire la suite","og_url":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/","og_site_name":"itrop","article_modified_time":"2022-04-06T12:50:07+00:00","og_image":[{"url":"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png","type":"","width":"","height":""}],"twitter_card":"summary_large_image","twitter_site":"@ItropBioinfo","twitter_misc":{"Dur\u00e9e de lecture estim\u00e9e":"1 minute"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"WebPage","@id":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/","url":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/","name":"Trainings 2019 - PERL - itrop","isPartOf":{"@id":"https:\/\/bioinfo.ird.fr\/#website"},"primaryImageOfPage":{"@id":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#primaryimage"},"image":{"@id":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#primaryimage"},"thumbnailUrl":"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png","datePublished":"2020-11-06T08:22:10+00:00","dateModified":"2022-04-06T12:50:07+00:00","breadcrumb":{"@id":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#breadcrumb"},"inLanguage":"fr-FR","potentialAction":[{"@type":"ReadAction","target":["https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/"]}]},{"@type":"ImageObject","inLanguage":"fr-FR","@id":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#primaryimage","url":"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png","contentUrl":"https:\/\/southgreenplatform.github.io\/trainings\/\/images\/trainings-perl.png"},{"@type":"BreadcrumbList","@id":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/833-2\/#breadcrumb","itemListElement":[{"@type":"ListItem","position":1,"name":"Accueil","item":"https:\/\/bioinfo.ird.fr\/index.php\/en\/front-page-2\/"},{"@type":"ListItem","position":2,"name":"Trainings &#8211; FR","item":"https:\/\/bioinfo.ird.fr\/index.php\/trainings-fr\/"},{"@type":"ListItem","position":3,"name":"Trainings 2019 &#8211; PERL"}]},{"@type":"WebSite","@id":"https:\/\/bioinfo.ird.fr\/#website","url":"https:\/\/bioinfo.ird.fr\/","name":"itrop","description":"","publisher":{"@id":"https:\/\/bioinfo.ird.fr\/#organization"},"potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/bioinfo.ird.fr\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"fr-FR"},{"@type":"Organization","@id":"https:\/\/bioinfo.ird.fr\/#organization","name":"i-Trop","url":"https:\/\/bioinfo.ird.fr\/","logo":{"@type":"ImageObject","inLanguage":"fr-FR","@id":"https:\/\/bioinfo.ird.fr\/#\/schema\/logo\/image\/","url":"https:\/\/bioinfo.ird.fr\/wp-content\/uploads\/2021\/10\/i-tropTwt5.png","contentUrl":"https:\/\/bioinfo.ird.fr\/wp-content\/uploads\/2021\/10\/i-tropTwt5.png","width":1356,"height":1356,"caption":"i-Trop"},"image":{"@id":"https:\/\/bioinfo.ird.fr\/#\/schema\/logo\/image\/"},"sameAs":["https:\/\/x.com\/ItropBioinfo"]}]}},"_links":{"self":[{"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/pages\/833","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/comments?post=833"}],"version-history":[{"count":2,"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/pages\/833\/revisions"}],"predecessor-version":[{"id":835,"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/pages\/833\/revisions\/835"}],"up":[{"embeddable":true,"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/pages\/1321"}],"wp:attachment":[{"href":"https:\/\/bioinfo.ird.fr\/index.php\/wp-json\/wp\/v2\/media?parent=833"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}